Nucleic Acids and Heredity
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One of the amazing facts associated with Darwin and Wallace's original evolutionary hypothesis was their lack of a coherent understanding of genetic mechanism. 

While it was clear that organisms varied, and that part of that variability was hereditable, the mechanism by which genetic information was stored and transmitted was unclear. 

Based on the work of Gregor Mendel in the 19th century, which was rediscovered and built on beginning in the early part of the 20th century, it quickly became clear that hereditary "factors" – which became known as genes, were present as discrete objects that could be passed (generally) unchanged from generation to generation.  

Specific genes could exist in different forms, known as alleles.  In higher organisms, two copies of each gene were present, one copy inherited from the maternal parent, the other from the paternal parent. 

It was, however, unclear what genes were made of, and how they stored information.

 


Miescher and family

 

Discovering how nucleic acids store genetic information  

Nucleic acids were first isolated as part of the phosphorus-containing compound nuclein from pus and sperm by Friedrich Miescher.

Later nuclein was resolved into an acidic compound, nucleic acid and a basic component, primarily proteins known as histones.

 

Eukaryotic cells contain a distinct structure, the nucleus, where nuclein was localized.

 

During cell division, the nucleus appeared to be replaced by densely staining bodies, known as chromosomes.

In 1887 Edouard van Beneden reported that the number of chromosomes was a constant for each species.

 

Different species had different numbers of chromosomes.

In 1902, Walter Sutton published his observations that chromosomes obey Mendel's rules of inheritance. 

This strongly suggested that Mendel's genetic factors were associated with the chromosomes.

 
species   chromosome #
Ophioglossum reticulatum (a fern)
Canis familiaris (dog)
Cavia cobaya (guinea pig)

60 (30 pairs)

Solanum tuberosom (potato)

48 (24 pairs)

Homo sapiens (humans)
Macaca mulatta (monkey)
Mus musculus (mouse)
Felis domesticus (house cat)
Saccharamyces cervisae (yeast)
Drosophila melanogaster (fruit fly)
Myrmecia pilosula (ant)
 

  That the hereditary information was localized to nuclei was further suggested by a number of observations, particularly the transplantation experiments of the Joachim Hammerling in the 1930's.
 
He showed that the information needed to control the morphology of the giant unicellular green alga Acetabularia, the mermaid's wineglass, was located within the region of the cell that contained the nucleus.

 

 

 

 

 

  • Based on the data presented, is there a correlation between the number of chromosomes and the complexity of an organism?
  • How do you know that the condensed chromosomes visible in some cells represent nuclear structures? 
  • What is the evidence that the number of chromosomes is constant for a particular species?
  • Would you expect closely related species would have the same number of chromosomes?  
  • How would Hammerling's observations have been different if the hereditary information was localized in the cytoplasm?  
 

smooth colonies
 

The proof that DNA was the genetic material came from a series of experiments initiated in 1920s by Fred Griffith.

He was studying two strains of the bacterium Streptococcus pneumoniae.

 

rough colonies
 
The two strains differed in the nature of the colonies they formed; in one case the colonies were smooth, in the other case, the colonies were rough.
 

He found that when cells of the smooth colony S strain were injected into mice the mice quickly sickened and died.

However, during extended cultivation in vitro, the S strain sometimes gave rise to rough (R) colonies.  Mice injected with R strain bacteria did not get sick.

Likewise, mice injected with heat killed S strain bacteria also did not get sick.

 
 

BUT, weirdly enough, mice co-injected with the living R and dead S bacteria did get sick and died!

From these dying mice, he isolated a new pathogenic smooth strain, which he termed S-II.  His hypothesis was that a non-living component derived from the dead S bacteria had "transformed" the avirulent R strain into the virulent S-II strain.

 

The molecular basis of transformation: 

In 1944, these studies were followed up by Oswald Avery, Colin McLeod and Maclyn McCarty. They set out to use the Griffith's assay to isolate the transforming principle responsible for turning R into S strains.

Their approach was to make cell extracts; they ground up cells and isolated various components (e.g. protein, nucleic acids, carbohydrates, lipids).  They then digested these extracts with various enzymes and asked whether the transforming principle was still intact.

 

Treating cellular extracts with proteases, which catalyze the hydrolysis of proteins, lipases, which degrade lipids, or RNAases, which degrade RNAs had no effect on transformation.

In contrast, treatment of the extracts with DNAase, which degrades DNA, destroyed the activity.

Furthermore, purification of the transforming substance suggested that it had the properties of DNA and subsequent studies have confirmed this conclusion.

DNA isolated from R strain bacteria did not produce S-strain bacteria, whereas DNA from S strain bacteria could transform R into S.

 
 
We conclude that DNA derived from S cells contains the information required for the conversion -- it is a gene or part of one.
 

Horizontal gene transfer: 

The process of transformation, the picking up and integrating DNA from the environment (as occurs during Griffith's experiments) has played a key role in early evolution and in the rapid evolution of bacteria today.

 

In the modern world, the rapid spread of antibiotic resistance is due to horizontal gene transfer. Genes encoding factors involved in bacterial resistance are released from dying bacteria, and can be acquired by their neighbors.

When we analyze the total DNA of an organism, its genome, we find evidence of for horizontal gene transfer, particularly within the prokaryotes. 

 

 

 

  • In Griffith's experiment, which are the positive and which are the negative controls?
  • What caused the change from S to R strains in culture? 
  • Would you expect to see R strains give rise to S strains at a similar frequency? 
  • How would horizontal gene transfer confuse molecular phylogenies? 

Use Wikipedia | revised 11-Mar-2008